Journal article
Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment
GigaScience, Vol.3(1)
2014
Abstract
Background: Penguins are flightless aquatic birds widely distributed in the Southern Hemisphere. The distinctive morphological and physiological features of penguins allow them to live an aquatic life, and some of them have successfully adapted to the hostile environments in Antarctica. To study the phylogenetic and population history of penguins and the molecular basis of their adaptations to Antarctica, we sequenced the genomes of the two Antarctic dwelling penguin species, the Adélie penguin [Pygoscelis adeliae] and emperor penguin [Aptenodytes forsteri].Results: Phylogenetic dating suggests that early penguins arose ~60 million years ago, coinciding with a period of global warming. Analysis of effective population sizes reveals that the two penguin species experienced population expansions from ~1 million years ago to ~100 thousand years ago, but responded differently to the climatic cooling of the last glacial period. Comparative genomic analyses with other available avian genomes identified molecular changes in genes related to epidermal structure, phototransduction, lipid metabolism, and forelimb morphology.Conclusions: Our sequencing and initial analyses of the first two penguin genomes provide insights into the timing of penguin origin, fluctuations in effective population sizes of the two penguin species over the past 10 million years, and the potential associations between these biological patterns and global climate change. The molecular changes compared with other avian genomes reflect both shared and diverse adaptations of the two penguin species to the Antarctic environment. © 2014 Li et al.; licensee BioMed Central Ltd.
Details
- Title
- Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment
- Authors
- C Li (Author)Yong Zhang (Author)Jianwen Li (Author)L Kong (Author)H Hu (Author)H Pan (Author)L Xu (Author)Y Deng (Author)Q Li (Author)L Jin (Author)H Yu (Author)Y Chen (Author)B Liu (Author)L Yang (Author)S Liu (Author)Yan Zhang (Author)Y Lang (Author)J Xia (Author)Sankar Subramanian (Author) - Griffith UniversityC D Millar (Author)W He (Author)Q Shi (Author)S Meader (Author)C M Rands (Author)M K Fujita (Author)M J Greenwold (Author)Todd A Castoe (Author)David D Pollock (Author)Wanjun Gu (Author)Kiwoong Nam (Author)Hans Ellegren (Author)Simon Y W Ho (Author)David W Burt (Author)Chris P Ponting (Author)Erich D Jarvis (Author)M Thomas P Gilbert (Author)Huanming Yang (Author)Jian Wang (Author)David M Lambert (Author)Jun Wang (Author)Guojie Zhang (Author)
- Publication details
- GigaScience, Vol.3(1); 15
- Publisher
- BioMed Central Ltd.
- Date published
- 2014
- DOI
- 10.1186/2047-217X-3-27
- ISSN
- 2047-217X
- Copyright note
- Copyright © 2014 Li et al.; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated
- Organisation Unit
- School of Science and Engineering - Legacy; University of the Sunshine Coast, Queensland; School of Science, Technology and Engineering; Centre for Bioinnovation
- Language
- English
- Record Identifier
- 99450448502621
- Output Type
- Journal article
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