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Nocardia australiensis sp. nov. and Nocardia spumae sp. nov., isolated from sea foam in Queensland, Australia2.50 MB
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Journal article
Nocardia australiensis sp. nov. and Nocardia spumae sp. nov., isolated from sea foam in Queensland, Australia
International Journal of Systematic and Evolutionary Microbiology, Vol.73, pp.1-12
2023
PMID: 37540199
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Strains USC-21046T and USC-21048T were isolated from foaming coastal marine waters on the Sunshine Coast, Queensland, Australia. Both strains displayed growth and morphological characteristics typical for members belonging to the genus Nocardia. The major polar lipids were diphosphatidylglycerol and phosphatidylethanolamine, and the major fatty acids were C16 : 0, C18 : 1 ω9c, C18 : 0 and C18 : 0 10-methyl. The mycolic acids of strains USC-21046T and USC-21048T consisted of chain lengths between 50-64 and 56-68, respectively. Moreover, both of those strains contained meso-diaminopimelic acid and ribose, arabinose, glucose and galactose as whole cell sugars. Based on the phylogenomic results, both strains belonged to the genus Nocardia with strain USC-21046T showing an 80.4 % genome similarity to N. vinacea NBRC 16497T and N. pseudovaccinii NBRC 100343T, whereas USC-21048T strain showed an 83.6 % genome similarity to N. aobensis NBRC 100429T. Both strains were delineated from their closely related relatives based on physiological (e.g. growth on sole carbon source) and chemotaxonomic (e.g. cellular fatty composition) differences. The digital DNA-DNA hybridization (dDDH) values between USC-21046T and USC-21048T and their closely related relatives were below the dDDH threshold value of ≤70 % used for the taxonomic classification of novel species status. The genome length of strains USC-21046T and USC-21048T were 6 878 863 and 7 066 978 bp, with G+C contents of 65.2 and 67.8 mol%, respectively. For the novel isolates, we propose the names Nocardia australiensis sp. nov. with the type strain USC-21046T (=DSM 111727T=NCCB 100867T) and Nocardia spumae sp. nov. with the type strain USC-21048T (=DSM 111726T=NCCB 100868T).
Details
- Title
- Nocardia australiensis sp. nov. and Nocardia spumae sp. nov., isolated from sea foam in Queensland, Australia
- Authors
- Luke Wright (Author) - University of the Sunshine Coast, Queensland, School of Science, Technology and EngineeringImen Nouioui (Author) - Leibniz Institute DSMZ – German Collection of Microorganisms and Cell CulturesYvonne Masters (Author) - University of New EnglandBoyke Bunk (Author) - Leibniz Institute DSMZ – German Collection of Microorganisms and Cell CulturesCathrin Spröer (Author) - Leibniz Institute DSMZ – German Collection of Microorganisms and Cell CulturesMeina Neumann-Schaal (Author) - Leibniz Institute DSMZ – German Collection of Microorganisms and Cell CulturesJacqueline Wolf (Author) - Leibniz Institute DSMZ – German Collection of Microorganisms and Cell CulturesMohammad Katouli (Author) - University of the Sunshine Coast, Queensland, Centre for BioinnovationD. İpek Kurtböke (Corresponding Author) - University of the Sunshine Coast, Queensland, School of Science, Technology and Engineering
- Publication details
- International Journal of Systematic and Evolutionary Microbiology, Vol.73, pp.1-12
- Publisher
- The Microbiology Society
- Date published
- 2023
- DOI
- 10.1099/ijsem.0.005952
- ISSN
- 1466-5034; 1466-5026
- PMID
- 37540199
- Copyright note
- © 2023 The Authors. This is an open-access article distributed under the terms of the Creative Commons Attribution License. This article was made open access via a Publish and Read agreement between the Microbiology Society and the corresponding author’s institution.
- Organisation Unit
- School of Science, Technology and Engineering; Centre for Bioinnovation
- Language
- English
- Record Identifier
- 99743097202621
- Output Type
- Journal article
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