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Multilocus Sequence Typing (MLST) of Chlamydiales
Book chapter   Peer reviewed

Multilocus Sequence Typing (MLST) of Chlamydiales

Martina Jelocnik, Adam Polkinghorne and Yvonne Pannekoek
Chlamydia trachomatis: Methods in Molecular Biology, pp.69-86
Methods in Molecular Biology, 2042, Humana
2019
PMID: 31385271

Abstract

multilocus sequence typing genetic diversity population structure sequence types PubMLST Chlamydia
Developed two decades ago as a molecular method to provide definite characterization of a bacterial isolate, Multilocus Sequence Typing (MLST) is today globally adopted as a universal fine-detailed molecular typing tool and has been applied to numerous pathogenic and nonpathogenic bacterial as well eukaryotic organisms. MLST utilizes DNA sequence of several conserved housekeeping (HK) genes which are assigned an allelic number, which then collectively constitute an allelic profile or sequence type (ST), a “molecular barcode” of the interrogated bacterial strain or a eukaryotic organism. Here, we describe the principles and molecular approaches for generating MLST data for an analysis of a bacteria in the order Chlamydiales, using a Chlamydia pecorum-specific MLST scheme as an example.

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