Logo image
An Expanded PD Phylogenetic Diversity Toolbox Integrates DNA Barcoding into Biodiversity Assessments in the Tropics
Abstract   Open access

An Expanded PD Phylogenetic Diversity Toolbox Integrates DNA Barcoding into Biodiversity Assessments in the Tropics

Daniel P Faith and Alison Shapcott
51st Association for Tropical Biology and Conservation Annual Meeting Book of Abstracts
Association for Tropical Biology and Conservation (ATBC) Annual Meeting, 51st (Cairns, Australia, 20-Jul-2014–24-Jul-2014)
2014
pdf
PDF - Published Version13.02 kBDownloadView
Published Version Open Access

Abstract

Genetics phylogenetic diversity toolbox DNA barcoding tropics
Evolutionary perspectives on the biodiversity importantly include the role of phylogeny in understanding the past and future of biodiversity. The PD phylogenetic diversity measure can help interpret DNA barcoding and similar genomics information, helping to overcome taxonomic and geographical knowledge gaps. PD has become a standard part of the genomics phylogenetic toolbox. The population pressures and fragmented rain forests of South Eastern Queensland highlight the need to extend PD for spatial planning. PD-based dissimilarities have provided largely descriptive ordinations in genomics, but can be expanded to produce useful conservation assessments. The ED method calculates complementarity values, enabling systematic conservation planning, plus distinctiveness and spatial homogeneity measures. ED analyses shed light on the ordination from the DNA barcode library for the South Eastern Queensland rain forest flora, developed by collaborators Shapcott et al (this symposium). This helps clarify conservation priorities from two important perspectives. Places with high total PD may be places that are relatively intact or healthy, providing important functions and ecosystem services. Other priority places are highly complementary, or distinctive, relative to other places in the region. For the SE Qld rain forest, the most diverse rainforest subregion is not the most distinctive.

Details

Metrics

109 File views/ downloads
1290 Record Views
Logo image